Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNASCCLPSVQPTLPNGSEHLQAPFFSNQSSSAFCEQVFIKPEVFLSLGIVSLLENILVILAVVRNGNLHSPMYFFLCSLAVADMLVSVSNALETIMIAIVHSDYLTFEDQFIQHMDNIFDSMICISLVASICNLLAIAVDRYVTIFYALRYHSIMTVRKALTLIVAIWVCCGVCGVVFI-----------------------VYSESKMVIVCLITMFFAMMLLMGTLYVHMFLFARLHVKRIAALPPADGVAPQQHSCMKGAVTITILLGVFIFCWAPFFL-HLVLIITCPTNPYCICYTAHFNTYLVLIMCNSVIDPLIYAFRSLELRNTFREILCGCNGMNLG |
4GBR Chain:A ((23-285)) | -------------------------------------------------------NVLVITAIAKFERLQTVTNYFITSLACADLVMGL--AVVPFGAAHILTKTWTFGNFWCEFWTSI--DVLCVT--ASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINCYAEETCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQKI------DKFCLKEHKALK---TLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILLNWIGYV-----NSGFNPLIYC-RSPDFRIAFQELLCL------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GBR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -286527 for 1759 contacts (-162.9/contact) +
2D Compatibility (PS) -24552 + (NN) -10172 + (LL) 5108
1D Compatibility (HY) -25600 + (ID) 3700
Total energy: -345443.0 ( -196.39 by residue)
QMean score : 0.336
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