Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAVQGSQRRLLGSLNSTPTAIPQLGLAANQTGARCLEVSISDGLFLSLGLVSLV-ENALVVATIAKNRNLHSPMYCFICCLALSDLLVSGSNVLETAVILLLEAGALVARAAVLQQLDNVIDVITCSSMLSSLCFLGAIAVDRYISIFYALRYHSIVTLPRARRAVAAIWVASVVFSTLFIAYY----DHVAVLLCL-------------------VVFFLAMLVLMAVLYVHMLARACQHAQGIARLHKRQRPVHQGFGLKGAVTLTILLGIFFLCWGPFFLHLTLIVLCPEHPTCGCIFKNFNLFLALI-ICNAIIDPLIYAFHSQELRRTLKEVLTCSW |
4GBR Chain:A ((9-284)) | ------------------------------------------GIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILTKTWTF---GNFWCEFWTSIDVLCVTASIETLC---VIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINCYAEETCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQKIDKFCLKEH--------KALKTLGIIMGTFTLCWLPFFI-VNIVHVIQDN----LIRKEVYILLNWIGYVNSGFNPLIYC-RSPDFRIAFQELLCL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GBR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -237644 for 1820 contacts (-130.6/contact) +
2D Compatibility (PS) -26573 + (NN) -14405 + (LL) 3360
1D Compatibility (HY) -29600 + (ID) 3900
Total energy: -308762.0 ( -169.65 by residue)
QMean score : 0.342
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