Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSENGSFANCCEAGGWAVRPGWSGAGSARPSRTPRPPWVAPALSAVLIVTTA-----VDVVGNLLVILSVLRNRKLRNAGNLFLVSLALADLVVAFYPYPLILVAIFYDGWALGEEHCKASAFVMGLSVIGSVFNITAIAINRYCYICHSMAYHRIYRRWHTPLHICLIWLLTVVALLP-----NFFVGSLEYDPRIYSCTFIQTASTQYTAAVVVIHFLLPIAVVSFCYLRIWVLVLQARRKAKPESRLCLKPSDLRS-------FLTMFVVFVIFAICWAPLNCIGLAVAINPQEMAPQIPEGLFVTSYLLAYFNSCLNAIVYGLLNQNFRREYKRILLALWNPRHCIQDASKGSHAEGLQSPAPPIIGVQHQADAL
4MQT Chain:A ((36-333))----------------------------------------KTFEVVFIVLVAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYTLYTVIGYWPLGPVVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPVKRTTKMAGMMIAAAWVLSFILWAPAILFWQFIVGVRTVEDGECYIQFFSNAAVTFGTAIAA--FYLPVIIMTVLYWHISRASK---------------------PSREKKVTRTILAILLAFIITWAPYNVM---VLIN-TFCAPCIPNTVWTIGYWLCYINSTINPACYALCNATFKKTFKHLLMC-------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4MQT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -269764 for 1880 contacts (-143.5/contact) +
2D Compatibility (PS) -26047 + (NN) -6666 + (LL) 4020
1D Compatibility (HY) -30800 + (ID) 3750
Total energy: -333007.0 ( -177.13 by residue)
QMean score : 0.335

(partial model without unconserved sides chains):
PDB file : Tito_4MQT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4MQT-query.scw
PDB file : Tito_Scwrl_4MQT.pdb: