Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPANFTEGSFDSSGTGQTLDSSPVACTETVTFTEVVEGKEWGSFYYSFKTEQLITLWVLFVFTIVGNSVVLFSTWRRKKKSRMT-FFVTQLAITDSFTGLVNILTDINWRFTGDFTAPDLVCRVVRYLQVVLLYASTYVLVSLSIDRYHAIVYPMKF--LQGEKQARVLIVIAWSLSFLFSIPTLIIFGKRTLSNGEVQCWALWPDDSYWTPYMTIVAFLV------YFIPLTIISIMYGIVIRTIWIKSKTYETVISNCSDGKLCSSYNRGLISKAKIKAIKYSIIIILAFICCWSPYFLFDILDNFN--LLPDTQERFYASVIIQNLPALNSAINPLIYC-------VFSSSISFPCREQRSQDSRMTFRERTERHEMQILSKPEFI |
| 3ZPR Chain:A ((2-299)) | -------------------------------------GAELLSQQWEAGMSLLMALVVLLI--VAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKCY----QDPGCCDFVTNRAYAIASSIISFYIPLL---IMIFVALR-VYREAKEQ-------------------MLMREH-KALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPD-----WLFVAFNWLGYANSAMNPIIYCRSPDFRKAFKRLL---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZPR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -186742 for 1896 contacts (-98.5/contact) +
2D Compatibility (PS) -26890 + (NN) -4460 + (LL) 6368
1D Compatibility (HY) -30000 + (ID) 4000
Total energy: -245724.0 ( -129.60 by residue)
QMean score : 0.169
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