Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGPIGAEADENQTVEEMKVEQYGPQTTPRGELVPDPEPELIDSTKLIEVQVVLILAYCSIILLGVIGNSLVIHVVIKFKSMRTVTNFFIANLAVADLLVNTLCLPFTLTYTLMGEWKMGPVLCHLVPYAQGLAVQVSTITLTVIALDRHRCIV--YHLESKISKRISFLIIGLAWGISALLASPLAIFREYSLIEIIPDFEIVACTEKWPGEEKSIYGTVYSLSSLLILYVLPLGIISFSYTRIWSKLKNHVSPGAANDHYHQ----RRQKTTKMLVCVVVVFAVSWLPLHAFQLAVDIDSQVLDLKEYKLIFTVFHIIAMCSTFANPLLYGWMNSNYRKAF--LSAFRCEQRLDAIHSEVSVTFKAKKNLEVRKNSGPNDSFTEATNV
2YCZ Chain:A ((21-299))-----------------------------------------------------------VVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALV-SFLPIMMHWWRDE---DPQALKCYQD-PGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIRKIDRASKRKRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVP----DWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLAF-----------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2YCZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -212749 for 2003 contacts (-106.2/contact) +
2D Compatibility (PS) -27427 + (NN) -4641 + (LL) 7528
1D Compatibility (HY) -26400 + (ID) 4300
Total energy: -267989.0 ( -133.79 by residue)
QMean score : 0.290

(partial model without unconserved sides chains):
PDB file : Tito_2YCZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YCZ-query.scw
PDB file : Tito_Scwrl_2YCZ.pdb: