Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDGENHSVVSEFLFLGLTHSWEIQLLLLVFSSVLYVASITGNIFIVFSVTTDPHLHSPMYFLLASLSFIDL----GACSVTSPKMIYDLFRKRKVISFGGCIAQIFFIHVIGGVEMVLLIAMAFDRYVALCKPLHYLTIMSPRMCLSFLAVAWTLGVSHSLFQLAFLVNLAF-CGPNVLDSFYCDLPRLLRLACTDTYRLQFMVTVNSGFIC---VGTFFILLI----SYVFILFTVWKHSSGGSSKALSTLSAHSTVV--------------LLFFGPPMFVYTRPHPNSQMDK-FLAI--FDAVLTPFLNPVVYTFRNKEMKAAIKRVCKQLVIYKKIS |
| 1HZX Chain:A ((34-315)) | ----------------LAEPWQFSMLA-AYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTT----LYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMS----------------NFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTV-KEAAA-----ATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFT--HQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDS |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1HZX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -235603 for 1856 contacts (-126.9/contact) +
2D Compatibility (PS) -24194 + (NN) 1643 + (LL) 3000
1D Compatibility (HY) -1200 + (ID) 750
Total energy: -257104.0 ( -138.53 by residue)
QMean score : 0.195
|
|
|