Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MWPNITAAPFLLTGFPGLEAAHHWISIPFFAVYVCILLGNGMLLYLIKHDHSLHEPMYYFLTMLAGTDLMVTLTTMP-----TVMGI-LWVNHREISSVGCFLQAYF--IHSLSVVES-GSLLAMAYDCFIAIRNPLRYASILTNTRVIALGVGVF-LRGFVSILPVILRLFSFSYCKSHVITRAFCLHQEIMRLACADITFNRLYPVILISLTIFLDCLIILFSYILILNTV------IGIASGEERA------KALNTCISHISCVLIFYVTVMGLTFIYRFGKN-VPEVVHIIMSYIYFLFPPLMNPVIYSIKTKQIQYGIIRLLSKHRFSS |
| 2YCW Chain:A ((21-299)) | -------------------------------VVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLW---------GSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWW------RDEDPQALKCYQDP---GCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIRKIDRASKRKRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYA-NSAMNPIIYC-RSPDFRKAFKRLLAF----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YCW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -255606 for 1864 contacts (-137.1/contact) +
2D Compatibility (PS) -25414 + (NN) 954 + (LL) 4220
1D Compatibility (HY) -28400 + (ID) 3500
Total energy: -307746.0 ( -165.10 by residue)
QMean score : 0.218
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