Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTETSLSSQCFPMSVLNNTIAEPLIFLLMGIPGLKATQYWISIPFCLLYVVAVSGNSMILFVVLCERSLHKPMYYFLSMLSATDLSLSLCTLSTTLGVFWFEAREINLNACIAQMFFLHGFTFMESGVL----------LAMAFDRFVAICYPLRYTTILTNARIAKIGMSMLIRNVAVMLPVMLFVKRLSFCSSMVLSHSYCYHVDLIQLSCTDNRINSILGLFALLSTTGFDCPCILLSYILIIRSVLSIASSEERR------------KAFNTCTSHISA-------VSIFYLPLISLSLVHRYGHSAPPFVHIIMANVFLLI-----PPVLNPIIYSVKIKQIQKAIIKVLIQKHSKSNHQLFLIRDKAIYE |
| 4UHR Chain:A ((18-314)) | -------------------------------------------------VLAILGNVLVCWAVWLNSNLQNVTNYFVVSAAAADILVGVLAIPFAIA--------ISTGFCAA----CHGCLFIACFVLVLTASSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNN---CGQPKEGKA---GCGEGQVACL---FEDVVPMNYMVYFNFFA--CVLVPLLLMLGVYLRIFLAARRQLKQMESQPLPGERARSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDC-HAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKI-IRSHVLRQQEPFKAAAA---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UHR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -193175 for 1819 contacts (-106.2/contact) +
2D Compatibility (PS) -26258 + (NN) -4055 + (LL) 6704
1D Compatibility (HY) -30400 + (ID) 3350
Total energy: -250534.0 ( -137.73 by residue)
QMean score : 0.205
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