Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKANETSPVMGFVLLRLSAHPELEKTFFVLILLMYLVILLGNGVLILVTILDSRLHTPMYFFLGNLSFLDICFTTSSVPLVLDSFLTPQETISFSA--CAVQMALSFAMAGTECLLLSMMAFDRYVAICNPLRYSVIMSKAAYMPMAASSWAIGGAASVVHTSLAIQLPFCGDNVINHFTCEILAVLKLACADISINVISMEVTNVIFLGVPVLFISF----SYVFIITTILRIPSAEGRK---------KVFSTCSAHLTVVIVFYGTLFFMYGKPKSKDSMGADKEDL-SDKLIPLF--YGVVTPMLNPIIYSLRNKDVKAAVRRLLRPKGFTQ |
| 2Y01 Chain:A ((9-299)) | ----------------------QWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPF--GATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSF----LPIMMHWWRDEDPQALKC----YQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQ-----------SRVMLMREHKALKTLGIIMGVFTLCWLPFFLV-------NIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLA------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2Y01.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -220031 for 1918 contacts (-114.7/contact) +
2D Compatibility (PS) -26374 + (NN) -5653 + (LL) 3796
1D Compatibility (HY) -24000 + (ID) 3450
Total energy: -275712.0 ( -143.75 by residue)
QMean score : 0.202
|
|
|