Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDLKNGSLVTEFILLGFFGRWELQIFFFVTFSLIYGATVMGNILIMVTVTCRSTLHSPLYFLLGNLSFLDMCLSTATTPKMIIDLLTDHKTISVWGCVTQMFFMHFFGGAEMTLLIIMAFDRYVAICKPL-HYRTIMSHKLLKGFAILSWIIGFLHSISQIV-LTMNLP-----FCG------HNVINNIFCDLPLVIKLACIETYTLELFVIA--DSGLLSFTCFILLLVSYIVILVSVPKKSSHGLSKALSTLSAHIIVVTLFFGPCIFIYV----WPFSSLASN-----KTLAVFYTVITPLLNPSIYTLRNKKMQEAIRKLRFQYVSSAQNF
2PED Chain:A ((58-316))-----------------------------------------NFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIM-GVA-FTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNN--------------ESFVIYMFVVHFIIPLIVIFFCYGQLV--FTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDD


General information:
TITO was launched using:
RESULT:

Template: 2PED.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -212722 for 1708 contacts (-124.5/contact) +
2D Compatibility (PS) -23251 + (NN) 3250 + (LL) 5552
1D Compatibility (HY) 1600 + (ID) 700
Total energy: -226271.0 ( -132.48 by residue)
QMean score : 0.239

(partial model without unconserved sides chains):
PDB file : Tito_2PED.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PED-query.scw
PDB file : Tito_Scwrl_2PED.pdb: