Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MENNTEVSEFILLGLTNAPELQVPLFIMFTLIYLITLTGNLGMIILILLDSHLHTPMYFFLSNLSLAGIGYSSAVTPKVLTGLLIEDKAISYS-----ACAAQMF---FCAVFATVENYLLSSMAYDRYAAVCNPLHYTTTMT-TRVCACLAIGCYVIGFLNASIQIGDTFRLSFCMSNVIHHFFCDKP---AVITLTCSEKHISELILVLISS-----FNVFFALLVTLISYLFILITIL---KRHTGKGYQKPLS----------TCGSHLIAIFLFYITVIIMYI-------RPSSSHSMDTDKIASVFYTMIIPMLSPIVYTLRNKDVKNAFMKVVEKAKYSLDSVF |
| 4UG2 Chain:A ((16-304)) | -------------------------------IAVLAILGNVLVCWAVWLNSNLQNVTNYFVV----------SAAAADILVGVLAIPFAIAISTGFCAACHGCLFIACFVLVLTASSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAI-CWVLSF-----AIGLTPMLGW--NN------CGQPKEGKAHSQGCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQL---------ARSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLR----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UG2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -240818 for 1809 contacts (-133.1/contact) +
2D Compatibility (PS) -24197 + (NN) -2221 + (LL) 4684
1D Compatibility (HY) -25200 + (ID) 3450
Total energy: -291202.0 ( -160.97 by residue)
QMean score : 0.305
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