Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAANVSGAKSCPANFLAAADDKLSGFQGDFLWPILVVEFLVAVASNGLALYRFSIRKQRPWHPAVVFSVQLAVSDLLCALTLPPLAAYLYPPKHWRYGEAACRLERFLFTCNLLGSVIFITCISLNRYLGIVHPFFARSHLRP-KHAWAVSAAGWVLAALLAMPTLSFSHLKRPQQGAGNCSVARPEACIKCLGTADHGLAAYRAYSLVLAGLGCG-LPLLLTLAAYGALGRAVLRSPGMTVAEKLRVAALVASGVALYASSYVPYHIMRVLNVDARRRW-STRCPSFADIAQATAALELGPYVGYQVMRGLMPLAF---CVHPLLYMAAVPSLGCCCRHCPGYRDSWNPEDAKSTGQALPLNATAAPKPSEPQSRELSQ |
4XT1 Chain:A ((50-300)) | ------------------------------------VVFLFGSIGNFLVIFTITWRRRIQCSGDVYF-INLAAADLLFVCTLPLWMQYL--LD-----SVPCTLLTACFYVAMFASLCFITEIALDRYYAIVY-----MRYRPVKQACLFSIFWWIFAVIIAIPHFMVVTKKDNQ----------------CMTDYDYLEVSYPIILNVELMLGAFVIPLSVISYCYYRISRIVAVSQS---RHKGRIVRVLIAVVLVFIIFWLPYHLTLFVDTLKLLKWISSSCEFERSLKRALILTE--------------SLAFCHCCLNPLLYVFVGTKFRQELHCLLAEFR---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XT1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -166498 for 1700 contacts (-97.9/contact) +
2D Compatibility (PS) -25160 + (NN) -11458 + (LL) 5656
1D Compatibility (HY) -27600 + (ID) 3650
Total energy: -228710.0 ( -134.54 by residue)
QMean score : 0.289
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