Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQAVDNLTSAPGNTSLCTRDYKITQVLFPLLYTVLFFVGLITNGLAM---RIFFQIRSKSNFIIFLKNTVISDLLMILTFPFKILSDAK--LGTGPLRTFVCQVTSVIFYFTMYISISFLGLITIDRYQKTTRPFKTSNPKNLLGAKILSVVIWAFMFLLSLPNMILTNRQPRDKNVKKCSFLKSEFGLVWHEIVNYICQVIFW--INFLIVIVCYTLITKELYRSYVRTRGVGKVPR--KKVNVKVFIIIAVFFICFVPFHFARIPYTLSQTRDVFDCTAENTLFYVK-ESTLWLTSLNACLDPFIYFFLCKSFRNSLISMLKCPNSATSLSQDNRKKEQDGGDPNEETPM |
| 4RWA Chain:A ((128-406)) | ------------------------------LYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIF--NLALADALATSTLPFQ---SAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLINICIWVLASGVGVPIMVMAVTRPRDGAV-VCMLQFPSPSWYW-DTVTKICVFLFAFVVPILIITVCYGLMLL----------GSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTL------VDIDRRDPLVVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLC----------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RWA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -204291 for 1911 contacts (-106.9/contact) +
2D Compatibility (PS) -25973 + (NN) -1188 + (LL) 4116
1D Compatibility (HY) -26400 + (ID) 3750
Total energy: -257486.0 ( -134.74 by residue)
QMean score : 0.172
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