Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGSLYSEYLNPNKVQEHYNYTKETLETQETTSRQVASAFIVILCCAIVVENLLVLIAVARNSKFHSAMYLFLGNLAASDLLAGVAFVANTLLSGSVTLRLTPVQWFAREGSAFITL------SASVFSLLAIAIERHVAIA-KVKLYGSDKSCRMLLLIGASWLISLVLGGLPILGWNCLG-------HLEAC---------STVLPLYAK---HYVLCVVTIFSIILLAIVALYVRIYCVVRSSHADMAAP------------QTLALLKTVTIVLGVFIVCWLPAFSILLLDYACPVHSCPILYKAHYFFAVSTLNSLLNPVIYTWRSRDLR---REVLRPLQCWRPGVGVQGRRRGGTPGHHLLPLRSSSSLERGMHMPTSPTFLEGNTVV |
| 4UHR Chain:A ((21-304)) | -----------------------------------------------ILGNVLVCWAVWLNSNLQNVTNYFVVSAAAADILVGV-------LAIPFAIAISTGFCAACHGCLFIACFVLVLTASSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGKA---GCGEGQVACLFEDVVPMNYMVYFNFFACVL----VPLLLMLGVYLRIFLAARRQLKQMESQPLPGERARSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDC-HAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLRQQEPFKAAAA------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UHR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -222739 for 1736 contacts (-128.3/contact) +
2D Compatibility (PS) -25110 + (NN) -11738 + (LL) 6200
1D Compatibility (HY) -26800 + (ID) 3950
Total energy: -284137.0 ( -163.67 by residue)
QMean score : 0.252
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