Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALTPESPSSFPGLAATGSSVPEPPGGPNATLNSSWASPTEPSSLEDLVATGTIGTLLSAMGVVGVVGNAYTLVVTCR-SLRAVASMYVYVVNLALADLLYLLSIPFIVATY----VTKEWHFGDVGCRVLFGLDFLTMHASIFTLTVMSSERYAAVLRPL--DTVQRPKGYRKLLALGTWLLALLLTLPVMLAMRLVRRGPKS------LCLPAWGPRAHRAYLTLLFATSIAGPGLLIGLLYARLAR------AYRRSQRASFKRARRPG-ARALR---LVL-GIVLLFWACFLPFWLWQLLAQYHQAPLAPRTARIVNY------LTTCLTYGNSCANPFLYTLLTRNYRDHLRGRVRGPGSGGGRGPVPSLQPRARFQRCSGRSLSSCSPQPTDSLVLAPAAPARPAPEGPRAPA |
| 4XEE Chain:A ((18-345)) | --------------------------GPNSDLDVN----------TDIYSKVLVTAIYLALFVVGTVGNSVTLFTLARK------STVHYHLGSLALSDLLILLLAMPVELYNFIWVHHPWAFGDAGCRGYYFLRDACTYATALNVASLSVERYLAICHPFKAKTLMSRSRTKKFIS-AIWLASALLAIPMLFTMGLQNRSADGTHPGGLVCTPIVDTATVKVVIQVNTFMSFLFPMLVISILNTVIANKLTVMV---------------PGRVQALRHGVLVLRAVVIAFVVCWLPYHVRRLMFCYISDE--QWTTFLFDFYHYFYMLTNALFYASSAINPILYNLVSANFRQVFLSTLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XEE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -207021 for 1883 contacts (-109.9/contact) +
2D Compatibility (PS) -27090 + (NN) -13604 + (LL) 3008
1D Compatibility (HY) -25200 + (ID) 4150
Total energy: -274057.0 ( -145.54 by residue)
QMean score : 0.359
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