Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLGSLGLWALLPTAVEAPPNRRTCVFFEAPGVRGSTKTLGELLDTGTELPRAIRCLYSRCCFGIWNLTQDRAQVEMQGCRDSDEPGCESLHCDPSPRAHPSPGSTLFTCSCGTDFCNANYSHLPPPGSPGTPGSQGPQAAPGESIWMALVLLGLFLLLLLLLGSIILALLQRKNYRVRGEPVPEPRPDSGRDWSVELQELPELCFSQVIREGGHAVVWAGQLQGKLVAIKAFPPRSVAQFQAERALYELPGLQHDHIVRFITA---SRGGPGRLLSGPLLVLELHPKGSLCHYLTQYTSDWGSSLRMALSLAQGLAFLHEERWQNGQYKPGIAHRDLSSQNVLIREDGSCAIGDLGLALVLPGLTQPPAWTPTQPQGPAAIMEAGTQRYMAPELLDKTLDLQDWGMALRRADIYSLALLLWEILSRCPD--LRPDSSPPPFQLAYEAELGNTPTSDELWALAVQERRRPYIPSTWRCFATDP--DGLRELLEDCWDADPEARLTAECVQQRLAALAHPQESHPFPESCPRGCPPLCPEDCTSIPAPTILPCRPQRSACHFSVQQGPCSRNPQPACTLSPV |
| 3H9R Chain:A ((38-329)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTS---STQLW----LITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIF-GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMH-------------R-------VGTKRYMAPEVLDETIQV-DCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDV-----VPNDPSFEDMRKVVCVDQQRPNIPNRW---FSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKID---------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3H9R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -163808 for 2192 contacts (-74.7/contact) +
2D Compatibility (PS) -29278 + (NN) -21479 + (LL) 11520
1D Compatibility (HY) -26000 + (ID) 5300
Total energy: -234345.0 ( -106.91 by residue)
QMean score : 0.473
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