Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGAAAKLAFAVFLISCSSGAILGRSETQECLFFNANWEKDRTNQTGVEPCYGDKDKRRHCFATWKNISGSIEIVKQGCWLDDINCYDRTDCVEKKDSPEVYFCCCEGNMCNEKFSYFPEMEVTQPTSNPVTPKPPYYNILLYSLVPLMLIAGIVICAFWVYRHHKMAYPPVLVPTQDPGPPPPSPLLGLKPLQLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDT-HGQVGTRRYMAPEVLEGAIN---FQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRLTNIITTEDIVTVVTMVTNVDFPPKESSL
3MDY Chain:A ((37-335))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEI--FSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFI--------PNTRVGTKRYMPPEVLDESLNRNHFQ--SYIMADMYSFGLILWEVARRCVSG-GIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQDIKL-----------------------


General information:
TITO was launched using:
RESULT:

Template: 3MDY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -179533 for 2402 contacts (-74.7/contact) +
2D Compatibility (PS) -30202 + (NN) -5177 + (LL) 11560
1D Compatibility (HY) -25600 + (ID) 6150
Total energy: -235102.0 ( -97.88 by residue)
QMean score : 0.438

(partial model without unconserved sides chains):
PDB file : Tito_3MDY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3MDY-query.scw
PDB file : Tito_Scwrl_3MDY.pdb: