Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAKQYDSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTK--ASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR-YTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF----WSDPMPSDLKGMLSTHLTSMFEYLAPPRRKGSQITQQSTNQSRNPATTNQTEFERVF
4NST Chain:A ((12-334))---------------VDKFDIIGIIGEGTYGQVYKAKDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLIHRSVVNMKEIVTDKQD--------GAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLMEGLEYCHKKNFLHRDIKCSNILLNNSGQIKLADFGLARLY----NSEESRPYTNKVITLWYRPPELLLGEERYTPAIDVWSCGCILGELFTKKPIFQANLELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEF-SFIPSA-ALDLLDHMLTLDPSKRCTAEQTLQSDFLKDVELSKMAPPDL-----PHWQDCHELWSKK------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4NST.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -196277 for 2546 contacts (-77.1/contact) +
2D Compatibility (PS) -32578 + (NN) -12012 + (LL) 3620
1D Compatibility (HY) -37200 + (ID) 7550
Total energy: -281997.0 ( -110.76 by residue)
QMean score : 0.440

(partial model without unconserved sides chains):
PDB file : Tito_4NST.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4NST-query.scw
PDB file : Tito_Scwrl_4NST.pdb: