Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGAVSCRQGQHTQQGEHTRVAVPHKQGGNIRGPWARGWKSLWTGLGTIRSDLEELWELRGHHYLHQESLKPAPVLVEKPLPEWPVPQFINLFLPEFPIRPIRGQQQLKILGLVAKGSFGTVLKVLDCTQKAVFAVKVVPKVKVLQRDTVRQCKEEVSIQRQINHPFVHSLGDSWQGKRHLFIMCSYC-STDLYSLWSAVGCFPEASIRLFAAELVLVLCYLHDLGIMHRDVKMENILLDERGHLKLTDFGLSRHVPQGAQAYTICGTLQYMGERG
2F7Z Chain:E ((32-207))
----------------------------------------------------------------------------------------------ENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWTLCGTPEYLAPEI
General information:
TITO was launched using:
RESULT:
Template:
2F7Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -103666 for 1248 contacts (-83.1/contact) +
2D Compatibility (PS) -18718 + (NN) -4897 + (LL) 5192
1D Compatibility (HY) -16400 + (ID) 2700
Total energy: -141189.0 ( -113.13 by residue)
QMean score : 0.388
(partial model without unconserved sides chains):
PDB file :
Tito_2F7Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2F7Z-query.scw
PDB file :
Tito_Scwrl_2F7Z.pdb
: