Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ------------------------------------------------------IDCGHVDS--LVRPCLSYVQGGPSPSGQC---CGGVQSLHNQAQ-----------SKSDRQAACNCLKGIARGIH-----NLNEDNARSLAPKCGVNLPYHISLDIDCNSV--------- |
1QPO Chain:A ((116-284)) | IATATAAWVDAVRGTKAKIRDTRKTLPGLRALQKYAVRTGGGVNHRLGLGDAALIKDNHVAAAGSVVDALRAVRNA-APDLPCEVEVDSLEQLDAVLPEKPELILLDNFAVWQTQTAVQRRDSRAPTVMLESSGGLSLQTAATY-AETGVDY---LAVGALTHSVRVLDIGLDM |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QPO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28860 for 451 contacts (-64.0/contact) +
2D Compatibility (PS) -9017 + (NN) -4399 + (LL) 0
1D Compatibility (HY) -3200 + (ID) 900
Total energy: -46376.0 ( -102.83 by residue)
QMean score : 0.415
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