Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ------------------------------------------------------------AVTCGDVTSAIAPCMSYATGQASSPSAGC---CSGVRTLNGKAS-----------TSADRQAACRCLKNLAGSF-----KGISMGNVANIPGECGVSVSFPINNNVNCDTLH-------- |
1QPO Chain:A ((116-284)) | IATATAAWVDAVRGTKAKIRDTRKTLPGLRALQKYAVRTGGGVNHRLGLGDAALIKDNHVAA-AGSVVDALRAVRNA------APDLPCEVEVDSLEQLDAVLPEKPELILLDNFAVWQTQTAVQRRDSRAPTVMLESSGGLSLQTAATY-AETGVD---YLAVGALTHSVRVLDIGLDM |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QPO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -20820 for 414 contacts (-50.3/contact) +
2D Compatibility (PS) -8853 + (NN) -3024 + (LL) 468
1D Compatibility (HY) -1600 + (ID) 800
Total energy: -34629.0 ( -83.64 by residue)
QMean score : 0.399
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