Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------------------------------AVTCGDVTSAVAPCMSYATGQTSAPSAGC---CSGVRTLNAKAS-----------TSADRQAACRCLKK-------LAGSGISMGNAANIPGKCGVSVSFPINTKVDCNTLH-------- |
| 1QPO Chain:A ((116-284)) | IATATAAWVDAVRGTKAKIRDTRKTLPGLRALQKYAVRTGGGVNHRLGLGDAALIKDNHVAAA------GSVVDALRAVRNA--APDLPCEVEVDSLEQLDAVLPEKPELILLDNFAVWQTQTAVQRRDSRAPTVMLESSGGLSLQTAATY-AETGVDY---LAVGALTHSVRVLDIGLDM |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QPO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -18046 for 407 contacts (-44.3/contact) +
2D Compatibility (PS) -8455 + (NN) -2876 + (LL) -48
1D Compatibility (HY) -2000 + (ID) 750
Total energy: -32175.0 ( -79.05 by residue)
QMean score : 0.257
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