Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -------------------------------------------------------------AVTCGDVTSAVAPCMSYARGQASAPSGAC---CSGVRTLNAKAS-----------TPADRKAACNCLKN-------LAGSGISMGNAANIPGKCGVSVSFPINTKTNCNNLH-------- |
1QPO Chain:A ((116-284)) | IATATAAWVDAVRGTKAKIRDTRKTLPGLRALQKYAVRTGGGVNHRLGLGDAALIKDNHVAAA------GSVVDALRAVRNA--APDLPCEVEVDSLEQLDAVLPEKPELILLDNFAVWQTQTAVQRRDSRAPTVMLESSGGLSLQTAATY-AETGVDY---LAVGALTHSVRVLDIGLDM |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1QPO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -14906 for 407 contacts (-36.6/contact) +
2D Compatibility (PS) -8516 + (NN) -3459 + (LL) 44
1D Compatibility (HY) -2400 + (ID) 750
Total energy: -29987.0 ( -73.68 by residue)
QMean score : 0.317
|
|
|