Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------------------------------------------------------------------------------------------------------------------LMSCGTVNG--NLAGCIAYLTRGAPLTQGC---CNGVTNLKNMAS-----------TTPDRQQACRCLQSAAKAV----GPGLNTARAAGLPSACKVNIPYKISASTNCNTVR---------- |
| 1O4U Chain:A ((1-273)) | MEKILDLLMSFVKEDEGKLDLASFPLRNTTAGAHLLLKTENVVASGIEVSRMFLEKMGLLSKFNVEDGEYLEGTGVIGEIEGNTYKLLVAERTLLNVLSVMFSVATTTRRFAEKLKHAKIAATRKILPGLGVLQKIAVVHGGGDCVMIKDNHLKMYGSAERAVQEVRKIIPFTTKIEVEVENLEDALRAVEAGADIVMLDNLSPEEVKDISRRIKDINPNVIVEVSGGITEENVSLY-DFETVDV---ISSSRLTLQEVFVDLSLEIQR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1O4U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -24851 for 469 contacts (-53.0/contact) +
2D Compatibility (PS) -9082 + (NN) -1481 + (LL) -124
1D Compatibility (HY) -2000 + (ID) 450
Total energy: -37988.0 ( -81.00 by residue)
QMean score : 0.394
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