Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QPPGGCVPQLNRLLACRAYLVPGAADPSADCCSALSSIS----------RDCACSTM----------GIINSIPSRCNIGRVNCSA
2ALG Chain:A ((3-77))
----TCGQVSSSLAPCIPYVRGG-GAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVS------
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34302 for 332 contacts (-103.3/contact) +
2D Compatibility (PS) -5549 + (NN) -1724 + (LL) 196
1D Compatibility (HY) -2800 + (ID) 550
Total energy: -44729.0 ( -134.73 by residue)
QMean score : 0.282
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: