Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSCNAQLSTLNVCGEFVV-----PGADRTNPSAECCNALEAVPNECLCNTFR-----------------------IASRLPSRCNIPTLSCS
1HSS Chain:A ((14-104))
------VPALPACRPLLRLQCNGSQVP-EAVLRDCCQQLAHISEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIV---
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39627 for 324 contacts (-122.3/contact) +
2D Compatibility (PS) -5450 + (NN) -1621 + (LL) 432
1D Compatibility (HY) -4800 + (ID) 500
Total energy: -51566.0 ( -159.15 by residue)
QMean score : 0.517
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: