Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
EGAGECGRSSPDRMALRMAPCISAADEPDSAPSSSCCSAVHTLGK--------SPSCLCAVMLSGTAKMA-GIKPEVAITIPKRCNMADRPVGYKCGDYTLP
2ALG Chain:A ((3-79))
---------TCGQVSSSLAPCIPYVRGG-GAVPPACCNGIRNVNNLARTTPDRQAACNC--LK-QLSASVPGVNPNNAAALPGKCGVSIP------------
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31162 for 434 contacts (-71.8/contact) +
2D Compatibility (PS) -6795 + (NN) -2763 + (LL) 220
1D Compatibility (HY) -3600 + (ID) 700
Total energy: -44800.0 ( -103.23 by residue)
QMean score : 0.253
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: