Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AEGAGECGRASPDRMALRMAPCISAADEPDSAPSSSCCSAVHTIGK--------SPSCLCAVMLSGTAKMA-GIRPEVAITIPKRCNIADRPVGYKCGDYTLP
2ALG Chain:A ((3-79))
----------TCGQVSSSLAPCIPYVRGG-GAVPPACCNGIRNVNNLARTTPDRQAACNC--LKQ-LSASVPGVNPNNAAALPGKCGVSIP------------
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33634 for 434 contacts (-77.5/contact) +
2D Compatibility (PS) -6788 + (NN) -2784 + (LL) 392
1D Compatibility (HY) -3600 + (ID) 700
Total energy: -47114.0 ( -108.56 by residue)
QMean score : 0.188
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: