Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGRMPINQAAASLSPCLPATKNPRGKVPPVCCAKVGALIRTNP-------RCLCAVMLSPLAKKA-GINPGIAIGVPKRCNIRNRPAGKRCGRYIVP
1T12 Chain:A ((2-78))
------ITCGQVTSNLAPCLAYLRNTG--PLGRCCGGVKALVNSARTTEDRQIACTC--LKS-AAGAISGINLGKAAGLPSTCGVNIP------------
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35297 for 478 contacts (-73.8/contact) +
2D Compatibility (PS) -7317 + (NN) -4857 + (LL) 476
1D Compatibility (HY) -4000 + (ID) 1150
Total energy: -52145.0 ( -109.09 by residue)
QMean score : 0.285
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: