Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
EDCTVDLKGLIRECKQYVMFPASPKITPSSACCSVVQKVNS----------PCLCSKVTKEIEKVVCMDKVVYVADYYKNPLK----PGSDCGSYHVPSQRR
1BWO Chain:A ((2-89))
-DCGHVDSLV-RPCLSYVQGG----PGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLPYTISLNIDCSR--------
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27886 for 471 contacts (-59.2/contact) +
2D Compatibility (PS) -7264 + (NN) -1421 + (LL) 828
1D Compatibility (HY) 0 + (ID) 900
Total energy: -36643.0 ( -77.80 by residue)
QMean score : 0.264
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: