Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QVCGANLSGLMNECQRYVSNAGPNSQPPSRSCCALIRPIDV----------PCACRYVSRDVTNY--IDMDKVVYVARSCGKKIP----SGYKCGSYTIPAA
1AFH Chain:A ((3-92))
-SCGQVASAI-APCISYARGQGS---GPSAGCCSGVRSLNNAARTTADRRAACNC--LKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRV-----
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38919 for 538 contacts (-72.3/contact) +
2D Compatibility (PS) -7635 + (NN) -2419 + (LL) 936
1D Compatibility (HY) -2800 + (ID) 900
Total energy: -51737.0 ( -96.17 by residue)
QMean score : 0.243
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: