Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AITCGTVTSSLAPCATYLSSGGE-VPPPCCAGVKKLNGMAQTTADRQQACKCLKAAAQ---GINPSLASSLPGKCSVSIPYPISMSTNCDNVK
1AFH Chain:A ((1-93))
AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRVN
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61914 for 726 contacts (-85.3/contact) +
2D Compatibility (PS) -8999 + (NN) -228 + (LL) 0
1D Compatibility (HY) -6800 + (ID) 2400
Total energy: -80341.0 ( -110.66 by residue)
QMean score : 0.443
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: