Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LSCSQVTSGLAPCLPYLQGR-GPLGGCCSGVKDLLAAAKTPADRKTACTCMKSTANSIKGIDAGKAASIPATCGVNIPYKISPSTDCTKVE
1BWO Chain:A ((1-90))
IDCGHVDSLVRPCLSYVQGGPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLPYTISLNIDCSRV-
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53359 for 617 contacts (-86.5/contact) +
2D Compatibility (PS) -9029 + (NN) -2906 + (LL) 104
1D Compatibility (HY) -9200 + (ID) 2100
Total energy: -76490.0 ( -123.97 by residue)
QMean score : 0.478
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: