Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ITC--GQV--SSALAPCIFYLRA---GGPIP----VPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSI-------PNLN----PNNAVGLPRACGVSIPYKISISTDCSKVR---------
1HSS Chain:A ((5-124))
-MCYPGQAFQVPALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI--------SEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIV--VDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54068 for 507 contacts (-106.6/contact) +
2D Compatibility (PS) -8339 + (NN) -3534 + (LL) 776
1D Compatibility (HY) -4800 + (ID) 1100
Total energy: -71065.0 ( -140.17 by residue)
QMean score : 0.325
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: