Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
APPSCPTVTTQLAPCLSYIQGGGDPSVPCCTGINNIYELAKTKEDRVAICNCLKTAFTHAGNVNPTLVAQLPKKCGISFNMPPIDKNYDCNTISMY
1BWO Chain:A ((1-90))
--IDCGHVDSLVRPCLSYVQGGPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLPY-TISLNIDCSRV---
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54819 for 622 contacts (-88.1/contact) +
2D Compatibility (PS) -9134 + (NN) -835 + (LL) 136
1D Compatibility (HY) -6400 + (ID) 1700
Total energy: -72752.0 ( -116.96 by residue)
QMean score : 0.568
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: