Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -------------------------------------------------------------AISCSTVISDLVPCLSYVTGSAASPTAAC---CNGVKALNAAAQ-----------TTPDRQAACKCIKSAAASY------HYNSAKADKIPALCGVNIGIPISPSTTCDKIH-------- |
1QPO Chain:A ((116-284)) | IATATAAWVDAVRGTKAKIRDTRKTLPGLRALQKYAVRTGGGVNHRLGLGDAALIKDNHVAAA------GSVVDALRAVR--NAAPDLPCEVEVDSLEQLDAVLPEKPELILLDNFAVWQTQTAVQRRDSRAPTVMLESSGGLSLQTAATY-AETGVD---YLAVGALTHSVRVLDIGLDM |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1QPO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -21678 for 401 contacts (-54.1/contact) +
2D Compatibility (PS) -8544 + (NN) -1497 + (LL) 344
1D Compatibility (HY) -2800 + (ID) 850
Total energy: -35025.0 ( -87.34 by residue)
QMean score : 0.403
|
|
|