Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------------------------------------GITCGMVSSKLAPCIGYLKGGPLGGGC---CGGIKALNAAAA-----------TTPDRKTACNCLKSAANAIK-----GINYGKAAGLPGMCGVHIPYAISPSTNCNAVH-------- |
| 1QPO Chain:A ((116-284)) | IATATAAWVDAVRGTKAKIRDTRKTLPGLRALQKYAVRTGGGVNHRLGLGDAALIKDNHVAAAG--------SVVDALRAVRNAAPDLPCEVEVDSLEQLDAVLPEKPELILLDNFAVWQTQTAVQRRDSRAPTVMLESSGGLSLQTAATY-AETGVDY---LAVGALTHSVRVLDIGLDM |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QPO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -21698 for 395 contacts (-54.9/contact) +
2D Compatibility (PS) -8499 + (NN) -1585 + (LL) 440
1D Compatibility (HY) -3200 + (ID) 700
Total energy: -35242.0 ( -89.22 by residue)
QMean score : 0.286
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