Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------------------D---ISCSDVLN--DLSPCLPFLQGKAAKPSESNNQCCDGVRALYAAAD-----------TRPDRQATCRCLKAAYVQV-----HAVL-SAAQELPGDCGLSLSYNITPDIDCDKIE-------- |
| 1QPO Chain:A ((116-284)) | IATATAAWVDAVRGTKAKIRDTRKTLPGLRALQKYAVRTGGGVNHRLGLGDAALIKDNHVAAAGSVVDALRAVR--NAAPDLPCEVEVDSLEQLDAVLPEKPELILLDNFAVWQTQTAVQRRDSRAPTVMLESSGGLSLQTAATY-AETGVDY---LAVGALTHSVRVLDIGLDM |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QPO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -34332 for 489 contacts (-70.2/contact) +
2D Compatibility (PS) -9371 + (NN) -850 + (LL) -264
1D Compatibility (HY) -800 + (ID) 650
Total energy: -46267.0 ( -94.62 by residue)
QMean score : 0.392
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