Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ADAGAGAACEPA--QLAVCASAILGGTKPSGECCGNLRA-----------QQGCLCQYVKDPNYGHY--VSSPHARDTLNLCGIPVPHC
2ALG Chain:A ((2-79))
------ITCGQVSSSLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNC--LKQLS-ASVPGVNPNNAAALPGKCGVSIP--
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27057 for 382 contacts (-70.8/contact) +
2D Compatibility (PS) -6181 + (NN) 1844 + (LL) 416
1D Compatibility (HY) -4000 + (ID) 900
Total energy: -35878.0 ( -93.92 by residue)
QMean score : 0.253
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: