Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
FSLCNMSEDDLMTCKPAVSKPSPVDPSPECCKALSGADL----------TCLCSYKNSETLPFLGIDPDLAMALPSKCNLTPPASC
1BWO Chain:A ((2-79))
--DCGHVDSLVRPCLSYVQGG--PGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGI--HNLNEDNARSIPPKCGVNLPY--
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10253 for 436 contacts (-23.5/contact) +
2D Compatibility (PS) -6937 + (NN) -4520 + (LL) -44
1D Compatibility (HY) -1600 + (ID) 750
Total energy: -24104.0 ( -55.28 by residue)
QMean score : 0.259
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: