Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSTICKMPVAGLMSCKPSVTPPNPTAPSADCCSALSHAD----------LNCLCSYKNSNLLPSLGIDPKLAMQLPGKCKLPHPANC
1BWO Chain:A ((2-78))
---DCGHVDSLVRPCLSYVQGG--PGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGI--HNLNEDNARSIPPKCGVNLP---
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22682 for 435 contacts (-52.1/contact) +
2D Compatibility (PS) -6886 + (NN) -6892 + (LL) -124
1D Compatibility (HY) -1200 + (ID) 700
Total energy: -38484.0 ( -88.47 by residue)
QMean score : 0.257
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: