Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSCNTDLTDLVSKCQRFVIKTGPKFSPSPSCCAVVKNVDV----------ACVCDLITKEIED--MIDMDKMVYVARSCGKKIS----AGTKCGNTQANAGGIVSGYIVPTA
1AFH Chain:A ((3-92))
-SCGQVASAI-APCISYARGQGS--GPSAGCCSGVRSLNNAARTTADRRAACNC--LKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRV----------------
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29455 for 530 contacts (-55.6/contact) +
2D Compatibility (PS) -7615 + (NN) -1947 + (LL) 1332
1D Compatibility (HY) -1600 + (ID) 850
Total energy: -40135.0 ( -75.73 by residue)
QMean score : 0.278
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: