Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
EMAHGVCNLSSAGIRACQPAAAIRNPTDQPSSECCAALAGADL----------ACLCRYKNAAGVWVRFY-RIDINRAMGLPGKCGLAMPANC
1AFH Chain:A ((3-80))
-----SCGQVASAIAPCISYARGQGS--GPSAGCCSGVRSLNNAARTTADRRAACNC-LKNAA----AGVSGLNAGNAASIPSKCGVSIP---
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32874 for 485 contacts (-67.8/contact) +
2D Compatibility (PS) -6855 + (NN) -2935 + (LL) 892
1D Compatibility (HY) -2800 + (ID) 1050
Total energy: -45622.0 ( -94.07 by residue)
QMean score : 0.170
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: