Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QQTCAGQLRGLAPCLRYSVPPL--PGQVPPAPGPECCSALGAVSRDCACGTFS-----------------------IINSLPAKCALPPVSCQ
1HSS Chain:A ((14-104))
-------VPALPACRPLLRLQCNGSQ-VPEAVLRDCCQQLAHISEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIV---
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32596 for 358 contacts (-91.1/contact) +
2D Compatibility (PS) -5443 + (NN) 2346 + (LL) 708
1D Compatibility (HY) -5200 + (ID) 900
Total energy: -41085.0 ( -114.76 by residue)
QMean score : 0.317
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: