Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QISTSCTASMISSFTPCLNFITGSTSNGSSPTQGCCGAVKSLMS---G----SMDCACLIITANVPFQLPINRTLALGLPRACNMGGVPVQCKGGN
1BWO Chain:A ((2-78))
----DCGHVDS-LVRPCLSYVQGG----PGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIAR-GIH-NLNEDNARSIPPKCGVNLP--------
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50225 for 447 contacts (-112.4/contact) +
2D Compatibility (PS) -7519 + (NN) -4345 + (LL) 328
1D Compatibility (HY) -3600 + (ID) 950
Total energy: -66311.0 ( -148.35 by residue)
QMean score : 0.252
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: