Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AITCSQVSSYLAPCIPYLRGSGGAVPSNCCSGIKNLNGAAQTSQDRKAACGCIKNAAGSISGINYALASQMPSKCGVSIPYQISPNIDCNSVN
1SIY Chain:A ((1-91))
-MTCGQVQGNLAQCIGFLQK-GGVVPPSCCTGVKNILNSSRTTADRRAVCSCLKAAAGAVRGINPNNAEALPGKCGVNIPYKISTSTNCNSIN
General information:
TITO was launched using:
RESULT:
Template:
1SIY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70015 for 700 contacts (-100.0/contact) +
2D Compatibility (PS) -9394 + (NN) -4437 + (LL) 116
1D Compatibility (HY) -8800 + (ID) 2300
Total energy: -94830.0 ( -135.47 by residue)
QMean score : 0.606
(partial model without unconserved sides chains):
PDB file :
Tito_1SIY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SIY-query.scw
PDB file :
Tito_Scwrl_1SIY.pdb
: