Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSAAECKQERKILVNACKAVITRK-PPTPYCCERLRVTHV----------SCVCPVITPQLAALIDVNYAIKVIQGCGIQVP----RHSKCGSITTP
1BWO Chain:A ((2-89))
----DCGHVDSLV-RPCLSYVQGGPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLPYTISLNIDCSR----
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35834 for 466 contacts (-76.9/contact) +
2D Compatibility (PS) -7094 + (NN) 410 + (LL) 740
1D Compatibility (HY) -2000 + (ID) 650
Total energy: -44428.0 ( -95.34 by residue)
QMean score : 0.326
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: