Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LTCPEVSKALVPCVTYLATGS-SFVHCCTQIRLLNSKANTTSDRQGVCRCLTSLAAQFQRRHRLNFNLVKQLPGKCNVNIRYNITTQNPNCSQVK
1BWO Chain:A ((1-90))
IDCGHVDSLVRPCLSYVQGGPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIH---NLNEDNARSIPPKCGVNLPYTISLNI-DCSRV-
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62287 for 603 contacts (-103.3/contact) +
2D Compatibility (PS) -8970 + (NN) -1399 + (LL) 168
1D Compatibility (HY) -7200 + (ID) 1500
Total energy: -81188.0 ( -134.64 by residue)
QMean score : 0.376
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: