Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------YGPCGKHDIEKEAEKLAPCTKAAQYLEAPVSKRC--CTVMEKKLKN----PDCLCA----------------IMF-------SHTARSAGVNPEVAVTIPKRCNI-PVRPV--GHKCGAFPLV--------------------------- |
| 1OCX Chain:A ((1-182)) | STEKEKMIAGELYRSADETLSRDRLRARQLIHRYNHSLAEEHTLRQQILADLFGQVTEAYIEPTFRCDYGYNIF-LGNNFFANFDCVMLDVCPIRIGDNCMLAPGVHIYTATHPIDPVARNSGAELGKPVTIGNNVWIGGRAVINPGVTIGDNVVVASGAVVTKDVPDNVVVGGNPARIIKKL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OCX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38060 for 478 contacts (-79.6/contact) +
2D Compatibility (PS) -9708 + (NN) 840 + (LL) 64
1D Compatibility (HY) -2000 + (ID) 900
Total energy: -49764.0 ( -104.11 by residue)
QMean score : 0.308
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