Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
SACSSTFFSALVQLIPCRAAVAPFSPIPPNEACCNAIKALG----------QPCLCVLVNGPPISGVDRNMALQLPEKCTANFEPCDVMK
1BWO Chain:A ((2-78))
-----DCGHVDSLVRPCLSYVQGG--PGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLP------
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37422 for 435 contacts (-86.0/contact) +
2D Compatibility (PS) -6905 + (NN) -6309 + (LL) 252
1D Compatibility (HY) -2000 + (ID) 800
Total energy: -53184.0 ( -122.26 by residue)
QMean score : 0.310
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: